Flagship Pioneering

Vice President, AI Research and Real-World Evidence

Flagship Pioneering$263K — $346K *
Pharmaceuticals & Biotech
11 - 15 years of experience
Job Overview by Ladders

Qualifications

  • PhD or master's degree in a quantitative discipline such as biostatistics or computer science, combined with extensive healthcare experience.
  • At least 12 years in AI research, health data science, or clinical evidence generation, preferably in early-stage companies.
  • Deep expertise in machine learning for both structured and unstructured health data, particularly causal inference and deep learning techniques.
  • Experience in transitioning clinical AI models from research to real-world validation and production.
  • Proven skills in designing and executing clinical studies, both retrospective and prospective.
  • Familiarity with modern research and machine learning tools like Python, PyTorch, and scikit-learn.
  • Strong understanding of healthcare data standards and privacy requirements, including HIPAA and HITRUST.

Responsibilities

  • Own the multi-year research roadmap focused on predictive modeling and causal inference.
  • Translate research goals into actionable milestones and resource plans.
  • Ensure scientific rigor in the development of AI models and uphold data quality standards.
  • Oversee the design and execution of research programs and model validation efforts.
  • Define and manage product readiness criteria in collaboration with Engineering and Product teams.
  • Lead clinical studies to evaluate product performance and establish real-world evidence.
  • Recruit and mentor a multidisciplinary research team to foster a high-performance culture.

Benefits

  • Comprehensive healthcare coverage for employees.
  • Annual incentive program to reward performance.
  • Retirement benefits with employer contributions.
  • Access to a variety of additional employee benefits.
Full Job Description
About the role

The Vice President of AI Research and Real-World Evidence owns FL113's scientific agenda, model methodology and performance, clinical validation, and evidence generation. You will determine which scientific questions to pursue, how to assess model performance and clinical utility, and what evidence is required to support product readiness, customer adoption, and regulatory strategy.

You will work closely with peer leaders across Engineering, Product, and GTM, as well as customers, health-system partners, and the broader Flagship ecosystem, to shape product development and delivery. You will retain accountability for scientific rigor, model performance, and real-world evidence. Research defines scientific requirements and acceptance criteria; Engineering owns production architecture, implementation, deployment, and operations. Together, we will use evidence from models, pilots, and customers to refine product-market fit and build products that earn trust in the real world.

Key Responsibilities

Set the Scientific Agenda
  • Own and continuously evolve a multi-year research roadmap spanning predictive modeling, causal inference, and longitudinal analysis, informed by scientific, clinical, product, and market evidence.
  • Translate the research roadmap into practical milestones, decision gates, and resource requirements.
  • Exercise pragmatic scientific and product judgment, connecting model performance to clinical value, customer ROI, and development time.
  • Define and uphold fit-for-purpose standards for data quality, model validation, study design, reproducibility, and responsible use of AI.
  • Apply AI-enabled tools and agentic workflows to accelerate research, experimentation, analysis, and team productivity.

Lead Model Development and Validation
  • Define the scope and design of research programs, including indication selection, data strategy, modeling approach, endpoints, and validation criteria.
  • Oversee model development and validation across structured and unstructured health data, including causal inference, deep learning, survival analysis, and longitudinal modeling.
  • Own model methodology, evaluation plans, research code and prototypes, and the evidence required to establish performance and clinical utility.
  • Review model results and limitations, mentor research scientists, and uphold scientific quality across the team.
  • Define research dataset requirements, analytical schemas, feature definitions, and data-quality criteria in partnership with Engineering.

Establish Product Readiness
  • Define scientific acceptance criteria and productization requirements with Product and Engineering.
  • Develop model-readiness and validation plans that specify what must be demonstrated before a model moves into production or a customer pilot.
  • Provide scientific requirements for interoperability, data architecture, deployment, and monitoring while Engineering retains ownership of the production stack.
  • Confirm that production implementations preserve validated model behavior and that monitoring plans can detect clinically meaningful performance changes.
  • Inform feature requirements and launch readiness using model evidence, clinical utility, and customer needs.

Build Clinical Evidence and Scientific Credibility
  • Design and oversee retrospective and prospective clinical studies with health-system partners.
  • Establish the real-world evidence strategy for evaluating product performance, clinical utility, workflow impact, and economic benefit.
  • Shape the scientific design and success criteria for pilots with biopharma companies, accountable care organizations, health systems, and other early customers.
  • Partner with clinical and regulatory experts to develop evidence plans supporting clinical decision support and software-as-a-medical-device pathways.
  • Work with GTM to define the scientific scope, data requirements, and evidence commitments for customer and research collaborations.
  • Communicate results, limitations, scientific risks, and technical opportunities clearly to internal and external stakeholders.
  • Build FL113's scientific credibility through engagement with key opinion leaders, publications, presentations, and external collaborations when appropriate.

Build and Lead the Research Organization
  • Recruit, lead, and develop a multidisciplinary team spanning machine learning, clinical research, real-world evidence, biostatistics, and health economics.
  • Set research priorities, direct day-to-day scientific operations, review technical work, and remove obstacles.
  • Create a culture that combines scientific rigor with the speed and practical judgment required in an early-stage company.
  • Establish effective working practices across Research, Engineering, Product, Clinical, Regulatory, and GTM.
  • Develop team members through direct technical mentorship, clear expectations, and accountability for reproducible results.

What We Look For
  • PhD or master's degree in biostatistics, computational biology, epidemiology, mathematics, computer science, or another relevant quantitative discipline, combined with deep healthcare or life-sciences experience.
  • At least 12 years of experience across AI research, health data science, clinical evidence generation, or product development, including success in early-stage or zero-to-one environments.
  • Deep hands-on expertise in machine learning for structured and unstructured health data, including causal inference, deep learning, survival analysis, and longitudinal modeling.
  • Experience taking clinical AI models from research through real-world validation and into production in partnership with engineering teams.
  • Experience designing, executing, and interpreting retrospective and prospective clinical studies.
  • Fluency with modern research and machine learning tools, including Python, PyTorch, scikit-learn, and AI-enabled development workflows.
  • Strong working knowledge of health data sources, including electronic health records, claims, omics, wearables, and digital biomarkers.
  • Working knowledge of healthcare data standards and clinical vocabularies such as FHIR, HL7, OMOP, SNOMED, LOINC, ICD, CPT, and RxNorm.
  • Familiarity with healthcare privacy, security, and compliance requirements, including HIPAA, HITRUST, and SOC 2.
  • Experience communicating with clinicians, key opinion leaders, customers, executives, and other technical and nontechnical audiences.

What will make you an exceptional fit
  • You thrive in ambiguity and are energized by zero-to-one company building.
  • You pair scientific rigor with sound entrepreneurial judgment, comfortable making consequential decisions amid the uncertainty and imperfection of an early-stage venture.
  • You have a track record of building, leading and inspiring high-performing, multidisciplinary teams in fast-moving environments.
  • You communicate complex methods, results, limitations, and decisions with clarity and relevance across audiences - whether they are research scientists or business executives.
  • You are AI-native, relentlessly applying agentic tools and workflows to accelerate research, sharpen experimentation, and amplify your team's output.

The salary range for this role is $263,000 - $346,500. Compensation for the role will depend on a number of factors, including a candidate's qualifications, skills, competencies, and experience. FL113 currently offers healthcare coverage, annual incentive program, retirement benefits and a broad range of other benefits. Compensation and benefits information is based on FL113's good faith estimate as of the date of publication and may be modified in the future.

About Flagship Pioneering

Flagship Pioneering is a life sciences innovation enterprise that conceives, creates, resources, and develops first-in-category life sciences companies. The firm operates through its Flagship Labs unit, which is a dedicated innovation foundry that invents and launches transformative companies. Flagship Pioneering has created over 100 scientific ventures, resulting in over $34 billion in aggregate value, 500+ issued patents, and more than 50 clinical trials for novel therapeutic agents. The firm's portfolio includes companies in the fields of therapeutics, health technologies, and sustainability. Flagship Pioneering was founded in 2000 and is headquartered in Cambridge, Massachusetts.
Learn more about Flagship Pioneering
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