Eli Lilly

Sr Principal Data, Analytics & AI Engineer

Eli Lilly • $133K — $224K *
Pharmaceuticals & Biotech
8 - 10 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's in Computer Science, Engineering, Data Science, Statistics, Supply Chain, or related field; 8+ years in data engineering, analytics, or AI/ML.
  • Experience with supply chain/manufacturing data; hands-on SAP (S/4HANA/ECC, BW/4HANA), SHARP.
  • Expertise in advanced statistical, machine learning, LLM/agentic app development including prompt engineering and RAG.
  • Deep knowledge of agent frameworks (LangChain, LangGraph) and production LLM APIs (OpenAI, Azure OpenAI).
  • Advanced proficiency in Python (preferred); familiarity with SQL, Java/Scala/R, and data visualization tools like Power BI.

Responsibilities

  • Own technical design and architecture for agentic AI and data modernization solutions.
  • Set standards for cloud-based data modeling, pipeline design, and agent orchestration.
  • Mentor junior and mid-level engineers, leading code and design reviews.
  • Partner with stakeholders to shape roadmaps and manage delivery sequences.
  • Develop deep knowledge of Global Supply Chain data domains and processes.
  • Correlate data across systems to produce insights for supply chain management.
  • Design and deploy AI agents and workflows for decision support across operations.

Benefits

  • Comprehensive benefits program including medical, dental, vision, and prescription drug benefits.
  • Eligibility to participate in a company-sponsored 401(k) and a pension plan.
  • Flexible benefits options for healthcare and dependent day care.
  • Vacation benefits and various leave of absence options.
  • Well-being benefits like employee assistance programs and fitness activities.
Full Job Description
We are seeking an experienced Senior Principal Data, Analytics & AI Engineer to join the Global DIA team within MQ Tech at Lilly. This role sits at the intersection of data engineering, supply chain domain expertise, and applied AI. You will architect the near-real-time data foundations that AI agents reason over and lead the design of the agents themselves - multi-agent workflows that read across manufacturing and supply chain systems, correlate signals that today sit in disconnected platforms, and put clear, actionable insight in front of the people running the line and the network.

This is a senior principal, hands-on delivery role with technical leadership expectations. You will own solutions end to end, set technical direction for correlating supply chain and manufacturing data through data modernization and agentic AI, and mentor engineers on the team. The solutions you build reach production and are used every shift, bringing transparency and decision support to Lilly's Supply Chain and Manufacturing operations.

Job Responsibilities

Technical leadership and architecture
  • Own the technical design and architecture for agentic AI and data modernization solutions across the Global Supply Chain and MQ landscape, from problem framing through production support.
  • Set standards and reusable patterns for cloud based data modeling, pipeline design, agent orchestration, and evaluation that other engineers build on.
  • Mentor and provide technical guidance to junior and mid-level engineers; lead code and design reviews.
  • Partner with senior business stakeholders and IT leadership to shape roadmaps, sequence delivery, and make build/buy trade-offs; direct and hold accountable external vendor and partner teams.


Supply chain data domain and analytics
  • Develop and apply deep working knowledge of Global Supply Chain data domains - material master, BOM and recipe, procurement, inventory and stock movements, production orders and batch execution, planning and scheduling, warehouse management, transportation management, distribution and logistics, quality and deviations.
  • Work fluently across SAP (S/4HANA, ECC, BW/4HANA - master data, MM, PP, QM, SD, and IBP) and SHARP, translating source-system semantics into trusted, business-ready data models.
  • Bring an informed point of view on end-to-end supply chain processes - S&OP, MRP, plan-to-produce, source-to-pay, order-to-cash, capacity and inventory management - and the analytics that support them, including service level, inventory turns, cycle time, schedule adherence, and supply risk.
  • Correlate supply chain and manufacturing data - linking ERP, planning, MES, historian, and quality data across systems and time - to produce integrated business solutions that answer questions no single system can, using data modernization and agentic AI.


Agentic AI and machine learning
  • Closely collaborate with the business & other global teams on agentic solution design, requirement gathering, solution development and delivery to drive meaningful business value
  • Design, build, and deploy AI agents and multi-agent workflows that automate analysis and decision support across manufacturing and supply chain use cases - including prompt engineering, tool and function calling, agent orchestration, and retrieval-augmented generation (RAG) over technical documents and operational data.
  • Define how agent performance is measured and improved: test scenarios, evaluation criteria, accuracy and hallucination monitoring, user feedback loops, agent observability, and guardrails that keep agent behavior safe, grounded, and within scope.
  • Implement, test, and deploy machine learning and predictive models into production, ensuring performance, scalability, and interpretability.


Data engineering and delivery
  • Design, build, and maintain scalable, reliable data pipelines using modern ETL/ELT tooling to ingest, process, and transform large datasets from diverse operational and enterprise sources in support of advanced analytics, reporting, and agentic AI.
  • Lead data modernization efforts - migrating and re-platforming legacy supply chain reporting and data assets onto modern lakehouse and cloud architectures.
  • Monitor and troubleshoot data quality and agent behavior issues, ensuring data integrity and reliability across all platforms.
  • Develop and maintain documentation for data architecture, data flows, agent designs, prompts, model choices, and deployments to support maintainability, validation, and GxP/CSV requirements.
  • Ensure compliance with all relevant data privacy, security, and responsible AI requirements.
  • Stay abreast of the fast-moving agentic AI and data engineering landscape and bring practical, proven advances into the team's work.


Basic Qualifications
  • Bachelor's in Computer Science, Engineering, Data Science, Statistics, Supply Chain, or related field with 8+ years in data engineering, analytics, or AI/ML, with hands-on production Gen-AI/agentic app delivery.
  • Experience in supply chain/manufacturing data, hands-on SAP (S/4HANA/ECC, BW/4HANA) , SHARP, MES and related data and analytics experience.
  • Hands-on advanced statistical, machine learning, LLM/agentic app development: prompt engineering, tool/function calling, RAG, vector search/embeddings, multi-step workflows.
  • Deep knowledge of agent frameworks (LangChain, LangGraph, or equivalent) and production LLM APIs (OpenAI, Azure OpenAI, Anthropic, Bedrock); Azure/AWS/Databricks.
  • Advanced Python (preferred); SQL,Java/Scala/R a plus, PowerBi/Tablue, Web Apps etc
  • Experience in end-to-end developing production grade analytics systems.


Preferred Qualifications
  • Masters in Computer Science, Engineering, Data Science, Statistics, Supply Chain, or related field with 5+ years in data engineering, analytics, or AI/ML, with hands-on production Gen-AI/agentic app delivery.
  • Experience in pharmaceutical, life sciences, or other regulated manufacturing supply chains.
  • Track record of taking multiple AI or agentic solutions through to production, including evaluation, monitoring, and iteration after go-live.
  • Strong command of manufacturing processes and metrics (OEE, downtime, yield, batch performance, right-first-time) alongside supply chain metrics.
  • Experience with supply chain planning software (SAP IBP, Kinaxis, o9) and IoT/streaming operational data.
  • Exposure to manufacturing data sources such as historians (OSI PI), MES/TrakSYS, PMX, or LIMS.
  • Experience working in a GxP-regulated environment, including CSV and validation practices.
  • Experience with data visualization tools (Power BI preferred).
  • Applied knowledge of responsible AI practices: model risk, bias, explainability, and data privacy.
  • Experience leading globally distributed teams or vendor partners.
  • Databricks, AWS or Azure certifications.


Additional Information:
• Position is located in Indianapolis, Indiana
• Full time position 5 days per week onsite

Actual compensation will depend on a candidate's education, experience, skills, and geographic location. The anticipated wage for this position is
$133,500 - $224,400

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly's compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

About Eli Lilly

ICOS Corporation is a biotechnology company that engages in the discovery, development, and commercialization of therapeutic products. It is engaged in the commercialization of treatments for unmet medical conditions, such as benign prostatic hyperplasia, hypertension, pulmonary arterial hypertension, cancer, and inflammatory diseases. It is the developer of a treatment known as Cialis (tadalafil), a product for the treatment of erectile dysfunction through its joint venture with Eli Lilly and Company in North America and Europe. It is also engaged in contract manufacturing services for third parties. It is in a strategic alliance with Solvay Pharmaceuticals, Inc. ICOS Corporation was established in 1989, based in Bothell, Washington. It is currently operated by Eli Lilly and Company.

Eli Lilly Careers

Joining Eli Lilly offers an unparalleled opportunity to become part of a leading global team dedicated to creating a healthier future. As a company revered for its commitment to innovation and leadership in the pharmaceutical industry, Eli Lilly is where your professional journey can flourish. Work You’ll Do At Eli Lilly, we are passionate about transforming patient care and advancing medical innovation. Our team at Eli Lilly is at the forefront of developing groundbreaking solutions in healthcare. By joining us, you will collaborate with some of the brightest minds in the industry, using cutting-edge technology to make real-world impacts. Lead with Innovation and Leadership Eli Lilly stands out in the marketplace by integrating deep industry expertise with robust research and development efforts. We are looking for professionals who are eager to drive change and lead the way in developing therapeutic breakthroughs. Explore Job Opportunities and Growth Eli Lilly offers a variety of career paths, including full-time positions and internships, across multiple functions such as research, marketing, IT, and sales. Whether you are a seasoned professional or a recent graduate, Eli Lilly provides an environment that promotes career growth and learning opportunities. Our commitment to diversity and leadership training ensures that every employee can achieve their potential. Be Part of Our Team Our team at Eli Lilly is committed to excellence and driven by a mission to improve lives. Employees enjoy a supportive culture that values collaboration, creativity, and diversity. We believe that a diverse workforce fosters innovation and helps us better connect with the communities we serve. Benefits and Culture Eli Lilly is dedicated to supporting our employees, offering competitive benefits, wellness programs, and comprehensive health care. Our culture is built on a foundation of respect, integrity, and quality, making Eli Lilly not just a great place to work, but a community to grow with. Networking and Professional Development Eli Lilly encourages continuous professional development and networking. With access to various training programs and mentorship opportunities, employees can enhance their skills and advance their careers. Our leadership is committed to nurturing talent through effective training and development strategies. Join Our Team Discover the exciting job opportunities at Eli Lilly by exploring open positions that match your skills and interests. We are continuously hiring and looking for individuals who are passionate, innovative, and ready to contribute to our mission of making life better for people around the globe. Stay Connected Keep up to date with the latest at Eli Lilly by following our careers blog. Gain insights from industry leaders and get tips on everything from crafting the perfect resume to preparing for your interview. Eli Lilly is not just a company—it's a place where you can make a difference. Explore the positions available and find out how your talents can help change the world. SEARCH ELI LILLY JOBS Stay ahead in your career with Eli Lilly, where innovation, leadership, and a commitment to diversity and growth lead the way to future advancements.
Learn more about Eli Lilly
Size
35,000 employees
Market Cap
$344.2 billion
Industry
Net Income
$6.1 billion
Founded
1876
5 Year Trend
+5.9%
Revenue
$24.5 billion
NASDAQ

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