Thermo Fisher Scientific

Scientific Application Test Engineer III – Chromatography and Mass Spectrometry

Thermo Fisher Scientific • $90K — $136K *
Pharmaceuticals & Biotech
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's degree in engineering, computer science, physical science, life science, chemistry, bioinformatics, or related discipline.
  • 3+ years of experience in product evaluation, software testing, or laboratory systems.
  • Hands-on experience with chromatography and mass spectrometry instrumentation.
  • Experience in setting up, configuring, and troubleshooting laboratory instruments.
  • Knowledge of qualitative and quantitative analytical chemistry.

Responsibilities

  • Test analytical instruments and related software including LC-MS and GC-MS workflows.
  • Independently configure, calibrate, and maintain laboratory instrumentation.
  • Develop verification strategies and execute test plans for product releases.
  • Perform exploratory and regression testing across integrated environments.
  • Identify verification gaps and recommend testing approaches.
  • Investigate and document complex defects in instruments and software.
  • Communicate technical findings and quality risks to stakeholders.

Benefits

  • Choice of national medical, dental, and vision plans including incentive programs.
  • Employee assistance and family support programs, tuition reimbursement, and commuter benefits.
  • At least 120 hours paid time off (PTO) and 10 paid holidays annually.
  • Retirement savings programs including a competitive 401(k) plan.
  • Employees’ Stock Purchase Plan (ESPP) offering discounted company stock.
Full Job Description

Work Schedule

Standard (Mon-Fri)

Environmental Conditions

Some degree of PPE (Personal Protective Equipment) required (safety glasses, gowning, gloves, lab coat, ear plugs etc.)

Job Description

Job Title: Scientific Application Test Engineer III – Chromatography and Mass Spectrometry

Job Location: San Jose, California

How will you make an impact?

As a Scientific Application Test Engineer III – Chromatography and Mass Spectrometry you will help ensure the quality, reliability, and performance of analytical instruments and scientific software used in chromatography and mass spectrometry workflows.

Working as part of a global Agile/Scrum team, you will combine hands-on laboratory instrumentation experience with software and system testing expertise. You will develop and execute verification strategies, evaluate end-to-end LC-MS and GC-MS workflows, troubleshoot complex instrument and software issues, and provide technical insight that helps deliver reliable, customer-focused products.

What will you do?
  • Test analytical instruments and related software, including chromatography systems, mass spectrometers, and end-to-end LC-MS and GC-MS workflows.
  • Independently connect, configure, calibrate, maintain, and troubleshoot laboratory instrumentation.
  • Develop and execute verification strategies, test plans, and test cases for instrument features, software capabilities, workflows, integrations, and product releases.
  • Perform exploratory, regression, system, and release-readiness testing across integrated hardware and software environments.
  • Identify verification gaps and technical risks and recommend appropriate testing approaches and coverage.
  • Investigate, reproduce, document, and verify complex instrument, software, workflow, and integration defects.
  • Assess customer impact, technical risk, and potential release implications of identified issues.
  • Analyze recurring defects and contribute to preventive quality and testing improvements.
  • Collaborate with software, hardware, product, project, and scientific teams to clarify requirements and improve product testability.
  • Communicate technical findings, quality risks, test results, blockers, and release-readiness information to technical and nontechnical stakeholders.
  • Improve verification methods, instrument setup, documentation, workflows, and overall team efficiency.
How will you get here?
Education
  • Bachelor’s degree in engineering, computer science, physical science, life science, chemistry, bioinformatics, or a related discipline; or equivalent professional experience.
Experience
  • Typically 3+ years of experience in product evaluation, software testing, laboratory systems, analytical instrumentation, scientific software, or a related field.
  • Hands-on experience with chromatography, mass spectrometry, instrument-control software, or related analytical technologies.
  • Experience setting up, configuring, calibrating, maintaining, and troubleshooting laboratory instruments.
  • Experience investigating and resolving instrument, software, workflow, or system-integration issues.
Knowledge, Skills, and Abilities
  • Knowledge of qualitative and quantitative analytical chemistry and laboratory workflows.
  • Strong analytical, troubleshooting, and problem-solving skills.
  • Ability to independently manage assigned responsibilities and provide clear technical recommendations.
  • Strong written and verbal communication skills, including the ability to communicate complex technical findings clearly.
  • Ability to collaborate effectively across software, hardware, product, project, and scientific teams.
  • Ability to work effectively in a multidisciplinary, matrixed, global environment.
Preferred Qualifications
  • Experience with software testing methodologies, test management tools, and defect-tracking systems in an Agile environment.
  • Experience developing or applying verification strategies for instruments, software, or integrated systems.
  • Understanding of interactions among firmware, software, hardware, and instrument interfaces.
  • Experience with software or hardware validation in a regulated environment.
  • Familiarity with FDA expectations, Quality System Regulations, or laboratory compliance practices.
  • Software testing certification, such as ISTQB.
  • Project coordination or project management experience.

Compensation and Benefits

The salary range estimated for this position based in California is $90,900.00–$136,350.00.

This position may also be eligible to receive a variable annual bonus based on company, team, and/or individual performance results in accordance with company policy. We offer a comprehensive Total Rewards package that our U.S. colleagues and their families can count on, which includes:

  • A choice of national medical and dental plans, and a national vision plan, including health incentive programs

  • Employee assistance and family support programs, including commuter benefits and tuition reimbursement

  • At least 120 hours paid time off (PTO), 10 paid holidays annually, paid parental leave (3 weeks for bonding and 8 weeks for caregiver leave), accident and life insurance, and short- and long-term disability in accordance with company policy

  • Retirement and savings programs, such as our competitive 401(k) U.S. retirement savings plan

  • Employees’ Stock Purchase Plan (ESPP) offers eligible colleagues the opportunity to purchase company stock at a discount

For more information on our benefits, please visit: https://jobs.thermofisher.com/global/en/total-rewards

About Thermo Fisher Scientific

Thermo Fisher Scientific Careers

Join the vibrant team at Thermo Fisher Scientific, a global leader in serving science and making the world healthier, cleaner, and safer. With a workforce of over 75,000 professionals, Thermo Fisher Scientific offers unparalleled job opportunities and a culture of innovation that propels your career to new heights. Work You’ll Do At Thermo Fisher Scientific, you will be part of a team that is dedicated to enabling our customers to make the world healthier. Whether you are involved in the development of life-saving drugs or innovative environmental solutions, your work will have a profound impact on society. Our commitment to leadership in the industry is unwavering. With Thermo Fisher Scientific, you will lead projects that set standards in scientific inquiry and market leadership. You will work at the intersection of science, technology, and industry expertise, driving digital innovation in every aspect of our business. Join our diverse team of professionals and engage in roles that span across various functions and disciplines. From research and development to marketing and sales, the breadth of job opportunities available means that you can find the perfect match for your skills and passions. Innovative Work As part of our team, you will have access to cutting-edge tools and technologies that foster creativity and innovation. Thermo Fisher Scientific is home to a dynamic range of career paths, all designed to challenge you and help you grow as a professional. Our employment philosophy emphasizes diversity and inclusivity, ensuring that all team members have the opportunity to thrive. We believe in nurturing talent through robust training programs, leadership development, and opportunities for career advancement. Be Part of a Great Team Working at Thermo Fisher Scientific means being part of a global network of enthusiastic, talented, and ambitious individuals. Our culture is built on collaboration, where each member’s unique skills and perspectives are valued. You will enjoy benefits that support both your professional growth and personal well-being. Future-Proof Your Career Embark on a journey of growth and continuous learning with Thermo Fisher Scientific. We offer a variety of training and development programs that cater to your interests and career goals. From internships for budding scientists to leadership training for aspiring executives, our programs are designed to equip you with the skills needed for a successful and fulfilling career. Explore Discover how our commitment to innovation leads to advancements in health and science: [Read More] Learn about our leadership in environmental sustainability and how you can contribute: [Read More] The Thermo Fisher Scientific Difference Our global presence and commitment to innovation mean that your work extends beyond borders and makes a tangible impact worldwide. The collaboration between our teams drives our leadership in the scientific community and contributes to a culture that embraces diversity and fosters professional growth. Stay Connected Join Our Team Search open positions that match your skills and interest. We are always on the lookout for passionate, curious, and driven team players. Explore our job opportunities and find out how you can contribute to our meaningful work. SEARCH THERMO FISHER SCIENTIFIC JOBS Keep Up to Date Stay ahead with career tips, insider perspectives, and industry-leading insights you can put to use today—all from the people who work here. READ CAREERS BLOG Job Alert Emails Customize your subscription to receive job alerts, latest news, and insider tips tailored to your preferences. Discover the exciting and rewarding opportunities that await at Thermo Fisher Scientific.
Learn more about Thermo Fisher Scientific
Size
130,000 employees
Market Cap
$213.3 billion
Industry
Net Income
$6.3 billion
Founded
1956
5 Year Trend
+16.5%
Revenue
$32.2 billion
NASDAQ

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