Role Overview• Build web applications and APIs that enable genomic data visualization and clinical reporting
• Collaborate closely with bioinformaticians, laboratory scientists, researchers, and clinicians to translate workflow needs into robust software solutions
• Develop, optimize, and maintain computational workflows for NGS data processing
• Improve performance, scalability, and reliability of existing pipelines and tools
• Ensure data quality, reproducibility, and proper documentation across all projects
Key Qualifications • BS in Bioinformatics, Computer Science, or related field + 5 years of experience OR MS in Bioinformatics, Computer Science, or related field + 2 years of experience
• Strong programming skills in Python
• Experience in web development (e.g., Flask, Django, React)
• Experience with relational databases (PostgreSQL, MySQL) and/or NoSQL (MongoDB)
• Hands-on experience with containerization (Docker, Kubernetes)
• Familiarity with version control (Git/GitHub) and CI/CD workflows
• Understanding of NGS data analysis workflows
• Strong debugging, analytical, and problem-solving skills
Preferred:
• Experience with cloud computing (AWS, GCP, or Azure)
• Knowledge of cancer genomics, variant calling, and annotation
Core Skills • Ability to translate scientific and clinical needs into maintainable, well-designed software
• Strong communication skills and comfort collaborating with multidisciplinary teams
• Ability to work in fast-paced research and clinical environments
• Commitment to reproducible, traceable, and well-documented work
Additional Information • Schedule: hybrid, at least 2 days a week in office, must reside in the NYC metro area
• Location: Joy Building, 321 E 61st Street, NYC
• Reporting to: Manager, Bioinformatics Pathology and Laboratory Medicine
Helpful Links:- Compensation Philosophy
- Benefits
Pay Range: $100,600.00 - $161,000.00
FSLA Status: Exempt
