Eli Lilly

Sr. AI Science Lead

Eli Lilly$259K — $380K *
Pharmaceuticals & Biotech
5 - 7 years of experience
Job Overview by Ladders

Qualifications

  • PhD in Machine Learning, Computer Science, Computational Chemistry, Computational Biology, Physics, Statistics, or closely related field.
  • 6+ years post-PhD experience in machine learning research and team leadership.
  • 3+ years experience leading scientific teams or research programs with technical direction responsibility.
  • Publication record in leading machine learning conferences or scientific journals.
  • Proficiency in Python and modern ML frameworks like PyTorch.

Responsibilities

  • Set architectural direction for large-scale AI and foundation models using Lilly data.
  • Lead design cycles that connect model predictions to experimental validation.
  • Establish scientific direction for next-gen AI methods and architectures.
  • Design and implement large-scale AI training on multi-GPU systems.
  • Mentor and develop high-performing teams of AI scientists and engineers.
  • Translate research breakthroughs into scientific impact through collaboration.

Benefits

  • Flexible hybrid work model with three days onsite and two days remote weekly.
  • Comprehensive benefit program including medical, dental, and vision coverage.
  • 401(k) with company match and pension benefits.
  • Vacation and various leave of absence benefits.
  • Well-being benefits including employee assistance programs and fitness initiatives.
Full Job Description
Where AI Meets Medicine: Build the Future of Drug Discovery in the Heart of Silicon Valley!

Making medicine that's never been made means doing what's never been done. If you're an engineer, scientist, or builder who thrives on problems no one has solved before, this is your invitation; we want you on the team. We are ready to challenge the status quo and push medicine forward, all in the name of health. Are you up for the challenge? If so, join us!

About the Lilly and NVIDIA Partnership

Lilly and NVIDIA are launching a new AI co-innovation lab in the heart of Silicon Valley - an up-to-$1 billion, multi-year commitment to solve drug discovery's toughest challenges. The lab brings Lilly scientists, technologists, chemists and biologists together with NVIDIA engineers under one roof. Together, we are building purpose-built foundation and frontier AI models trained on Lilly data at scale, tightening the feedback loop between automated wet labs and computational dry labs, designing the next generation of medicines for millions of patients across the globe.

What You'll Be Doing

As a Senior AI Science Lead, you will set scientific direction and technical strategy for large-scale AI research programs that advance drug discovery. You will lead a team of AI scientists and AI engineers while driving major initiatives across computational chemistry, computational genomics, and related domains, ensuring alignment between scientific priorities and organizational goals. In partnership with Lilly Research Labs and engineering and technology leaders, you will transform cutting-edge research into scalable capabilities that accelerate scientific impact. This role requires a track record of scientific leadership, strategic influence, and building large-scale AI research programs in the life sciences field.

How You'll Succeed

  • Set the architectural direction for large-scale AI and foundation models trained on Lilly chemical, biological, and experimental data.
  • Lead the design of the discovery learning cycle, connecting model predictions, experimental validation, and data generation to improve scientific outcomes.
  • Establish the scientific direction for next-generation AI methods, advancing model architectures, learning paradigms, and generative approaches while ensuring thorough evaluation against leading academic and industry benchmarks.
  • Design and lead the implementation of large-scale multi-GPU and multi-node AI training and inference systems on high-performance computing, on the most powerful supercomputer of the life sciences industry
  • Build, mentor, and develop high-performing teams of AI Scientists, AI Engineers, chemists and biologists, advancing scientific excellence and cultivating new research leaders
  • Translate research breakthroughs into measurable scientific impact through close partnership with Lilly Research Laboratories, engineering teams, and strategic collaborators, including NVIDIA.


What You Should Bring

  • Established scientific leadership with a track record of leading large-scale AI research programs and shaping strategy in chemistry, biology, or drug discovery.
  • Recognized expertise in computational chemistry, computational biology, genomics, molecular design, or related domains, with demonstrated scientific impact.
  • Proficiency in Python and modern machine learning frameworks such as PyTorch, with experience developing and evaluating novel models.
  • Experience in developing foundation models, self-supervised learning approaches, and large-scale generative AI systems, including training and optimization in large-scale distributed compute environments.
  • Demonstrable ability to design rigorous model evaluation strategies, including benchmarking, validation methodologies, and performance assessment frameworks.
  • Solid understanding of experimental biology, chemistry, or drug discovery workflows, with the ability to translate scientific challenges into machine learning solutions.
  • Experience building, mentoring, and developing high-performing technical or scientific teams.
  • Demonstrated commitment to scientific rigor, data integrity, intellectual property protection, and responsible AI practices.


Your Basic Qualifications

  • PhD in Machine Learning, Computer Science, Computational Chemistry, Computational Biology, Physics, Statistics, or a closely related quantitative field.
  • 6+ years of post-PhD experience advancing machine learning research, including leadership of research programs, technical strategy, and scientific teams in industry or academia.
  • 3+ years' experience leading scientific teams or research programs, including responsibility for technical direction and hiring.
  • Publication record in leading peer-reviewed machine learning conferences, scientific journals, or equivalent research venues.


Location & Work Flexibility
This role is based at our Silicon Valley Hub. We offer a flexible hybrid work model, with three days onsite and two days working remotely each week, supporting both collaboration and work-life balance.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE[redacted]), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Women's Initiative for Leading at Lilly (WILL).

Actual compensation will depend on a candidate's education, experience, skills, and geographic location. The anticipated wage for this position is
$259,500 - $380,600

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly's compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

About Eli Lilly

ICOS Corporation is a biotechnology company that engages in the discovery, development, and commercialization of therapeutic products. It is engaged in the commercialization of treatments for unmet medical conditions, such as benign prostatic hyperplasia, hypertension, pulmonary arterial hypertension, cancer, and inflammatory diseases. It is the developer of a treatment known as Cialis (tadalafil), a product for the treatment of erectile dysfunction through its joint venture with Eli Lilly and Company in North America and Europe. It is also engaged in contract manufacturing services for third parties. It is in a strategic alliance with Solvay Pharmaceuticals, Inc. ICOS Corporation was established in 1989, based in Bothell, Washington. It is currently operated by Eli Lilly and Company.

Eli Lilly Careers

Joining Eli Lilly offers an unparalleled opportunity to become part of a leading global team dedicated to creating a healthier future. As a company revered for its commitment to innovation and leadership in the pharmaceutical industry, Eli Lilly is where your professional journey can flourish. Work You’ll Do At Eli Lilly, we are passionate about transforming patient care and advancing medical innovation. Our team at Eli Lilly is at the forefront of developing groundbreaking solutions in healthcare. By joining us, you will collaborate with some of the brightest minds in the industry, using cutting-edge technology to make real-world impacts. Lead with Innovation and Leadership Eli Lilly stands out in the marketplace by integrating deep industry expertise with robust research and development efforts. We are looking for professionals who are eager to drive change and lead the way in developing therapeutic breakthroughs. Explore Job Opportunities and Growth Eli Lilly offers a variety of career paths, including full-time positions and internships, across multiple functions such as research, marketing, IT, and sales. Whether you are a seasoned professional or a recent graduate, Eli Lilly provides an environment that promotes career growth and learning opportunities. Our commitment to diversity and leadership training ensures that every employee can achieve their potential. Be Part of Our Team Our team at Eli Lilly is committed to excellence and driven by a mission to improve lives. Employees enjoy a supportive culture that values collaboration, creativity, and diversity. We believe that a diverse workforce fosters innovation and helps us better connect with the communities we serve. Benefits and Culture Eli Lilly is dedicated to supporting our employees, offering competitive benefits, wellness programs, and comprehensive health care. Our culture is built on a foundation of respect, integrity, and quality, making Eli Lilly not just a great place to work, but a community to grow with. Networking and Professional Development Eli Lilly encourages continuous professional development and networking. With access to various training programs and mentorship opportunities, employees can enhance their skills and advance their careers. Our leadership is committed to nurturing talent through effective training and development strategies. Join Our Team Discover the exciting job opportunities at Eli Lilly by exploring open positions that match your skills and interests. We are continuously hiring and looking for individuals who are passionate, innovative, and ready to contribute to our mission of making life better for people around the globe. Stay Connected Keep up to date with the latest at Eli Lilly by following our careers blog. Gain insights from industry leaders and get tips on everything from crafting the perfect resume to preparing for your interview. Eli Lilly is not just a company—it's a place where you can make a difference. Explore the positions available and find out how your talents can help change the world. SEARCH ELI LILLY JOBS Stay ahead in your career with Eli Lilly, where innovation, leadership, and a commitment to diversity and growth lead the way to future advancements.
Learn more about Eli Lilly
Size
35,000 employees
Market Cap
$344.2 billion
Industry
Net Income
$6.1 billion
Founded
1876
5 Year Trend
+5.9%
Revenue
$24.5 billion
NASDAQ

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