The Scripps Research Institute

Research Programmer III- Machine Learning & Computational Neuroscience, Kennedy Lab

The Scripps Research Institute$75K — $100K *
Healthcare
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's degree in Engineering, Computer Science, Data Science, Applied Math, or related fields, or equivalent experience.
  • Minimum of four years of experience in software application development or research programming.
  • Proficiency in Python for software development.
  • Experience in building and training deep neural networks for various learning problems.
  • Demonstrable knowledge of software application development principles.
  • Familiarity with version control systems, particularly git and GitHub.

Responsibilities

  • Contribute to research projects focused on understanding behavior and neural activity.
  • Develop computational methods to analyze sensory information and internal motivations.
  • Create machine learning and computer vision platforms for animal phenotyping.
  • Conduct independent research projects using existing datasets from leading universities.
  • Collaborate within a multidisciplinary lab environment to tackle open-ended research questions.

Benefits

  • Employer contributed retirement plan with optional 403(b) contributions.
  • Comprehensive health and welfare plans, including multiple medical options.
  • Flexible Spending Accounts for medical and dependent care expenses.
  • Generous vacation and sick leave policies.
  • Complimentary on-site parking.
Full Job Description
POSITION TITLE: Research Programmer III (Software Engineer)

POSITION SUMMARY:

The Kennedy laboratory is involved in numerous projects to track, quantify, and forecast individual and group behavior and relate it to recorded neural activity. We develop new computational methods to understand how agents (animals, humans, virtual) gather information about their sensory environment, integrate this with internal motivational needs, and execute goal-directed actions in complex, naturalistic environments. We also develop machine learning and computer vision platforms for high-throughput animal phenotyping, with the goal of accelerating drug screening and repurposing efforts at Scripps.

We seek motivated individuals interested in gaining hands-on experience in scientific research projects, with a goal of contributing to scientific papers and participating in an active lab environment. You will also have the opportunity to lead independent research projects on existing datasets from our collaborators (U Penn, UCLA, Harvard, U Utah, Northwestern, and others). This is an ideal position for applicants interested in building their scientific CV ahead of applying to graduate programs in Computational Neuroscience or Machine Learning, or those looking for a longer term position where they can contribute to original scientific research and model development.

REQUIREMENTS:

  • Bachelor's degree in Engineering, Computer Science, Data Science, Applied Math, or related field, or an equivalent combination of education, training and/or experience. Other STEM degrees may be accepted if accompanied with programming education, training, and/or experience.
  • Minimum of four years experience in software application development or research programming.
  • Experience with software development in Python.
  • Experience building and training deep neural networks for supervised, unsupervised, or reinforcement learning problems.
  • A demonstrated ability to apply the fundamentals of software application development.
  • Experience with version control, including git and github.


Please include code samples and/or a link to a public code repository with examples of your work.

PREFERRED SKILLSET:

Prior experience with the one or more of the following is preferred:

  • Experience with sequence/time series data, control/reinforcement learning problems and environments, time series forecasting.
  • An understanding of generative modeling (hidden Markov models, diffusion models, etc).
  • Familiarity with topics in motor control, robotics, and neuroscience.


As a member of a computational lab working in team projects, the following general skills are also preferred:

  • Experience developing scalable system architectures that adhere to good software engineering principles.
  • Ability to tackle large, open-ended research questions independently and as part of a team.
  • Willingness to be an active participant in a computational lab environment, including taking part in lab meetings, journal clubs, and hackathons.
  • Experience working within a diverse, interdisciplinary team.
  • Experience contributing to open source software projects.


LOCATION: La Jolla, California.

PHYSICAL REQUIREMENTS: This position works in an office environment, and it is expected that work will be primarily performed in-person.

COMPENSTAION:

The expected hiring range for this position is $75,000 to $100,000 per year, commensurate with experience.

COMPREHENSIVE BENEFITS INCLUDE:

  • Employer Contributed Retirement Plan - Depending on eligibility, employees receive an employer contributed retirement plan (no employee contribution required) and the option to contribute to a 403(b) (which is similar to a 401(k) using your own pre or post-tax dollars)
  • Full Suite of Health and Welfare plans including three medical plan options (including an HSA available option), dental, vision, life insurance, disability, EAP and more
  • Access to Flexible Spending Accounts (Medical/Dependent Care)
  • Competitive vacation and sick leave policies
  • Free, on-site parking


The above statements describe the level of work performed and expected in general terms. The statements are not intended to list all the responsibilities, duties and/or skills required of employees so classified, and the content herein is subject to change due to the business needs of Scripps Research, with or without notice. Furthermore, nothing in this job description shall be interpreted to be in conflict with or to eliminate or modify in any way the employment-at-will status of Scripps Research staff.

About The Scripps Research Institute

The Scripps Research Institute (TSRI) is a non-profit biomedical research organization that focuses on basic and applied research in the areas of biology, chemistry, and medicine. The institute was founded in 1924 by philanthropist Ellen Browning Scripps and is headquartered in La Jolla, California, with additional campuses in Jupiter, Florida and San Diego, California. TSRI employs over 3,000 scientists, technicians, and administrative staff, and has partnerships with numerous academic and industry organizations. The institute's research has led to the development of new drugs and therapies for a variety of diseases, including cancer, Alzheimer's, and HIV/AIDS.
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