Natera

Bioinformatics Production Analyst/Production Engineer

Natera$70K — $95K *
US-AnywhereRemote in United States
Pharmaceuticals & Biotech
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's degree in Biomedical Engineering, Computer Science, Bioinformatics, or a related field.
  • 2+ years of relevant professional experience.
  • Master's degree in a relevant scientific or technical discipline (preferred).
  • Previous experience in the biotechnology, diagnostics, or pharmaceutical industry (preferred).
  • Proficiency in Python for data analysis (preferred).
  • Familiarity with Linux command-line tools and SQL databases (preferred).
  • Knowledge of genomics and NGS analysis techniques.

Responsibilities

  • Analyze high-throughput DNA sequencing data to support product development and validation studies.
  • Proactively identify and implement improvements to production workflows.
  • Investigate and resolve data quality issues and technical problems in analysis pipelines.
  • Collaborate with cross-functional teams including biology, software engineering, and lab operations.
  • Produce formal study plans and technical reports as part of documentation efforts.
  • Ensure compliance with data privacy protocols regarding Protected Health Information (PHI).
  • Complete required HIPAA/PHI training within the first month of employment.

Benefits

  • Comprehensive medical, dental, vision, life, and disability plans for employees and their dependents.
  • Free testing for Natera employees and their immediate families.
  • Fertility care benefits.
  • Pregnancy and baby bonding leave.
  • 401k savings plan.
  • Commuter benefits.
  • Generous employee referral program.
Full Job Description
POSITION SUMMARY:

The Bioinformatics Production Analyst performs basic data analysis to provide bioinformatics support for Horizon Carrier Screening and future platform sequencing tests, while actively participating in production pipeline improvements. In this role, the analyst plays a pivotal part in ensuring Natera provides high-quality carrier screening and sequencing products.

PRIMARY RESPONSIBILITIES:
  • Data Analysis & Processing: Analyze high-throughput DNA sequencing data and perform basic data analysis to support product development, validation studies, and incoming experiment analysis requests.
  • Pipeline Improvement & Support: Help move data through the analysis pipeline while proactively identifying and implementing improvements to production workflows.
  • Troubleshooting: Investigate and resolve technical issues related to data quality, analysis pipelines, and system integration.
  • Cross-Functional Collaboration: Communicate effectively and work collaboratively with cross-functional teams, including biology, software engineering, lab operations, and medical/legal affairs.
  • Documentation: Produce high-quality written documentation, including formal study plans and technical reports.
  • Compliance & PHI Safety: Regularly handle Protected Health Information (PHI) in both paper and electronic formats, ensuring strict adherence to data privacy technologies and protocols.
  • Training & Certification: Complete required HIPAA/PHI privacy, security, and General Policies and Procedures Compliance training within the first 30 days of hire, and maintain current status on all ongoing company training requirements.


QUALIFICATIONS:

Minimum Qualifications:
  • Bachelor's degree in Biomedical Engineering, Computer Science, Bioinformatics, or a related equivalent field.
  • 2+ years of relevant professional experience.

Preferred Qualifications:
  • Master's degree in a relevant scientific or technical discipline.
  • Previous professional experience within the biotechnology, diagnostics, or pharmaceutical industry.


KNOWLEDGE, SKILLS, AND ABILITIES:
  • Experience using Python for data analysis and plotting preferred.
  • Experience using Linux command-line tools and relational databases (SQL) preferred, knowledge of data visualization tools/platforms a plus (plotly).
  • Knowledge of genomics, relevant NGS analyses (mapping, variant calling, etc.), and NGS file types is required. e.g. Know how to run pipelines and knowledge of pipeline platforms/languages (WDL, Nextflow).
  • Ability to produce high quality written documentation for varying audiences, e.g. validation reports
  • Familiarity with Large Language Models (LLMs), such as Claude Code, and how to leverage them to streamline workflows and tasks.
  • Ability to work independently while managing multiple objectives and timelines.
  • Desire to work in a fast-paced environment with potential for high impact in a small team.
  • Team player, self-motivated, and detail-oriented.


WHAT WE OFFER

Competitive Benefits - Employee benefits include comprehensive medical, dental, vision, life and disability plans for eligible employees and their dependents. Additionally, Natera employees and their immediate families receive free testing in addition to fertility care benefits. Other benefits include pregnancy and baby bonding leave, 401k benefits, commuter benefits and much more. We also offer a generous employee referral program!

For more information, visit www.natera.com.

About Natera

Natera is a biotechnology company that focuses on genetic testing and diagnostics. The company's products are designed to help diagnose and treat genetic diseases, cancer, and other conditions. Natera's pipeline includes products for reproductive health, oncology, and organ transplantation. The company was founded in 2003 and is headquartered in San Carlos, California.
Learn more about Natera
Size
2,670 employees
Market Cap
$4.5 billion
Industry
Net Income
-$229.7 million
Founded
2004
5 Year Trend
+24.1%
Revenue
$391 million
NASDAQ

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