Eli Lilly

AI Scientist (Model Building & Training)

Eli Lilly$168K — $268K *
Pharmaceuticals & Biotech
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • PhD in a quantitative field (Machine Learning, Computer Science, etc.)
  • 2+ years of post-PhD research experience
  • Deep expertise in computational chemistry/biology or genomics
  • Recognized contributions to ML research, particularly in scientific applications
  • Advanced Python proficiency with experience in frameworks like PyTorch or JAX
  • Leadership in research initiatives from concept to scientific validation
  • Experience with designing and evaluating neural networks on GPU infrastructure

Responsibilities

  • Design and evaluate generative and predictive models for drug discovery
  • Translate machine learning techniques into practical scientific applications
  • Develop evaluation strategies linking model performance to scientific outcomes
  • Collaborate with interdisciplinary teams to foster AI application in research
  • Lead research projects from idea generation to tangible impacts

Benefits

  • Flexible hybrid work model with three days onsite and two remote
  • Access to employee resource groups for networking and support
  • Comprehensive health benefits including medical, dental, and vision
  • 401(k) and pension plan eligibility
  • Well-being programs including fitness benefits and employee clubs
Full Job Description
Where AI Meets Medicine: Build the Future of Drug Discovery in the Heart of Silicon Valley!

Making medicine that's never been made means doing what's never been done. If you're an engineer, scientist, or builder who thrives on problems no one has solved before, this is your invitation, we want you on the team. We are ready to challenge the status quo and push medicine forward, all in the name of health. Are you up for the challenge? If so, join us!

About the Lilly and NVIDIA Partnership

Lilly and NVIDIA are launching a new AI co-innovation lab in the heart of Silicon Valley - an up-to-$1 billion, multi-year commitment to solve drug discovery's toughest challenges. The lab brings Lilly scientists, technologists, chemists and biologists together with NVIDIA engineers under one roof. Together, we are building purpose-built foundation and frontier AI models trained on Lilly data at scale, tightening the feedback loop between automated wet labs and computational dry labs, designing the next generation of medicines for millions of patients across the globe.

What You'll Be Doing

As an Advisor - AI Scientist, you will design, train, and evaluate foundation models that advance scientific discovery across chemistry and biology. Working at the intersection of machine learning, chemistry, biology, and physics, you will conduct fundamental research to develop AI approaches that deepen our understanding of molecular and biological systems. Using Lilly's proprietary experimental data, you will build and validate generative and predictive models that help transform scientific insights into drug discovery breakthroughs.

How You'll Succeed

  • Advance the state of the art in AI for drug discovery by designing and developing generative and predictive models for molecular, chemical, and biological systems.
  • Translate machine learning into scientific impact across challenges such as molecular design, target identification, genomics, and structure-based discovery.
  • Design rigorous evaluation strategies that connect model performance to meaningful scientific and experimental outcomes.
  • Partner closely with researchers, engineers, and domain experts to accelerate the application of AI in discovery programs.
  • Drive research from concept to impact, balancing scientific innovation with practical application.


What You Should Bring

  • Deep expertise in computational chemistry/biology, genomics, or a related scientific field.
  • Recognized expertise in ML research, with significant contributions to generative, predictive, or foundation models for scientific applications.
  • Shown impact through publications at leading research venues, patents, open-source contributions, or other notable scientific achievements.
  • Advanced proficiency in Python and modern machine learning frameworks (e.g., PyTorch or JAX), with the ability to independently design, implement, train, and evaluate AI models.
  • Experience leading complex research initiatives from hypothesis through scientific validation and impact.
  • Demonstrated ability to collaborate across scientific and technical disciplines and communicate complex findings to diverse audiences.
  • Experience designing, training, and evaluating large neural networks on GPU infrastructure.
  • Prior experience applying machine learning to chemical, biological, or other scientific data.


Your Basic Qualifications

  • PhD in Machine Learning, Computer Science, Computational Chemistry, Computational Biology, Bioinformatics, Physics, Statistics, or a closely related quantitative field.
  • 2+ years of relevant research experience beyond the PhD, in industry or in a postdoctoral research position.


Location & Work Flexibility
This role is based at our Silicon Valley Hub. We offer a flexible hybrid work model, with three days onsite and two days working remotely each week, supporting both collaboration and work-life balance.

Our employee resource groups (ERGs) offer strong support networks for their members and are open to all employees. Our current groups include: Africa, Middle East, Central Asia (AMECA), Black Employees at Lilly (BE[redacted]), Chinese Culture Network (CCN), EnAble, Evolve, Lilly Indian Network (LIN), Organization of Latinx at Lilly (OLA), Pride (LGBTQ+ Allies), Veterans Leadership Network (VLN) and Women's Initiative for Leading at Lilly (WILL).

Actual compensation will depend on a candidate's education, experience, skills, and geographic location. The anticipated wage for this position is
$168,000 - $268,400

Full-time equivalent employees also will be eligible for a company bonus (depending, in part, on company and individual performance). In addition, Lilly offers a comprehensive benefit program to eligible employees, including eligibility to participate in a company-sponsored 401(k); pension; vacation benefits; eligibility for medical, dental, vision and prescription drug benefits; flexible benefits (e.g., healthcare and/or dependent day care flexible spending accounts); life insurance and death benefits; certain time off and leave of absence benefits; and well-being benefits (e.g., employee assistance program, fitness benefits, and employee clubs and activities).Lilly reserves the right to amend, modify, or terminate its compensation and benefit programs in its sole discretion and Lilly's compensation practices and guidelines will apply regarding the details of any promotion or transfer of Lilly employees.

#WeAreLilly

About Eli Lilly

ICOS Corporation is a biotechnology company that engages in the discovery, development, and commercialization of therapeutic products. It is engaged in the commercialization of treatments for unmet medical conditions, such as benign prostatic hyperplasia, hypertension, pulmonary arterial hypertension, cancer, and inflammatory diseases. It is the developer of a treatment known as Cialis (tadalafil), a product for the treatment of erectile dysfunction through its joint venture with Eli Lilly and Company in North America and Europe. It is also engaged in contract manufacturing services for third parties. It is in a strategic alliance with Solvay Pharmaceuticals, Inc. ICOS Corporation was established in 1989, based in Bothell, Washington. It is currently operated by Eli Lilly and Company.

Eli Lilly Careers

Joining Eli Lilly offers an unparalleled opportunity to become part of a leading global team dedicated to creating a healthier future. As a company revered for its commitment to innovation and leadership in the pharmaceutical industry, Eli Lilly is where your professional journey can flourish. Work You’ll Do At Eli Lilly, we are passionate about transforming patient care and advancing medical innovation. Our team at Eli Lilly is at the forefront of developing groundbreaking solutions in healthcare. By joining us, you will collaborate with some of the brightest minds in the industry, using cutting-edge technology to make real-world impacts. Lead with Innovation and Leadership Eli Lilly stands out in the marketplace by integrating deep industry expertise with robust research and development efforts. We are looking for professionals who are eager to drive change and lead the way in developing therapeutic breakthroughs. Explore Job Opportunities and Growth Eli Lilly offers a variety of career paths, including full-time positions and internships, across multiple functions such as research, marketing, IT, and sales. Whether you are a seasoned professional or a recent graduate, Eli Lilly provides an environment that promotes career growth and learning opportunities. Our commitment to diversity and leadership training ensures that every employee can achieve their potential. Be Part of Our Team Our team at Eli Lilly is committed to excellence and driven by a mission to improve lives. Employees enjoy a supportive culture that values collaboration, creativity, and diversity. We believe that a diverse workforce fosters innovation and helps us better connect with the communities we serve. Benefits and Culture Eli Lilly is dedicated to supporting our employees, offering competitive benefits, wellness programs, and comprehensive health care. Our culture is built on a foundation of respect, integrity, and quality, making Eli Lilly not just a great place to work, but a community to grow with. Networking and Professional Development Eli Lilly encourages continuous professional development and networking. With access to various training programs and mentorship opportunities, employees can enhance their skills and advance their careers. Our leadership is committed to nurturing talent through effective training and development strategies. Join Our Team Discover the exciting job opportunities at Eli Lilly by exploring open positions that match your skills and interests. We are continuously hiring and looking for individuals who are passionate, innovative, and ready to contribute to our mission of making life better for people around the globe. Stay Connected Keep up to date with the latest at Eli Lilly by following our careers blog. Gain insights from industry leaders and get tips on everything from crafting the perfect resume to preparing for your interview. Eli Lilly is not just a company—it's a place where you can make a difference. Explore the positions available and find out how your talents can help change the world. SEARCH ELI LILLY JOBS Stay ahead in your career with Eli Lilly, where innovation, leadership, and a commitment to diversity and growth lead the way to future advancements.
Learn more about Eli Lilly
Size
35,000 employees
Market Cap
$344.2 billion
Industry
Net Income
$6.1 billion
Founded
1876
5 Year Trend
+5.9%
Revenue
$24.5 billion
NASDAQ

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