Flagship Pioneering

Senior UAS Flight Test & Operations Engineer

Flagship Pioneering$115K — $150K *
Aerospace & Defense
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's or Master's degree in aerospace engineering, aviation, atmospheric science, or related field; equivalent operational experience may be accepted.
  • 5 years experience (BA/BS) or 3 years experience (MS) with a minimum of 2 years hands-on UAV flight operations in real settings.
  • FAA Part 107 Remote Pilot Certificate is mandatory; experience with BVLOS waivers is preferred.
  • Proficiency with ArduPilot systems, including mission scripting and GCS software.
  • Practical flight experience with fixed-wing airframes and manual RC aircraft operation.
  • Familiarity with RF link monitoring and compliance for long-range UAV operations.
  • Strong documentation skills for operational and regulatory purposes.

Responsibilities

  • Lead planning and execution of BVLOS operations and flight tests, ensuring waiver compliance and risk assessment.
  • Oversee testing of a custom fixed-wing airframe, leading from first flight to design validation.
  • Own the strategy for FAA Part 107 waivers and ensure international regulatory compliance.
  • Develop and maintain operating procedures, pre-flight checklists, and emergency protocols.
  • Act as primary pilot-in-command and flight test director for UAV missions.
  • Analyze flight data to identify issues and improve mission reliability.
  • Coordinate with weather resources for mission decision-making.

Benefits

  • Healthcare coverage.
  • Annual incentive program.
  • Retirement benefits.
  • Broad range of additional benefits.
Full Job Description
THE ROLE

We are seeking a UAS Flight Operations Engineer II to join our growing hardware team. This is a field-oriented role for someone who thrives in the operational reality of long-range UAV missions - planning and executing BVLOS flights, managing regulatory compliance, and ensuring safe, mission-ready operations in demanding environments. You will lead the operational framework for our fixed-wing UAV platform: from waiver strategy and airspace coordination to real-time mission monitoring and post-flight analysis. You will work alongside a small, highly technical team, bridging the gap between engineering development and field execution as we scale from early prototype flights to hardened, field-proven operations in complex international environments.

KEY RESPONSIBILITIES
  • Lead BVLOS operations planning and flight test execution, including waiver compliance, pre-flight risk assessment, and real-time mission monitoring;
  • Lead flight testing of a custom fixed-wing airframe, from first flight and envelope expansion through iterative design validation with the engineering team;
  • Own the FAA Part 107 waiver strategy, COA applications, and international UAS regulatory compliance across operating environments;
  • Develop and maintain standardized operating procedures, pre-flight checklists, and emergency response protocols for field campaigns;
  • Serve as primary pilot-in-command and/or flight test director for fixed-wing UAV missions, including manual RC proficiency during test and contingency operations;
  • Analyze flight logs (MAVExplorer, Flight Review) to diagnose anomalies and drive iterative improvements to mission reliability and safety margins;
  • Coordinate with meteorological resources and integrate atmospheric sensing data to support mission go/no-go decision-making;
  • Collaborate with science and field teams to validate mission profiles, sensor data quality, and operational success criteria;
  • Manage ground control station operations, C2 link monitoring, and spectrum compliance during live missions;
  • Document flight operations, incident reports, and lessons learned to build a scalable operational knowledge base for the drone program.

PROFESSIONAL EXPERIENCE & QUALIFICATIONS
  • Bachelor's or Master's degree in aerospace engineering, aviation, atmospheric science, or a closely related field; equivalent operational experience will be considered.
    • BA/BS + 5 years of experience or MS + 3 years of experience with at least 2 years, of hands-on UAV flight operations experience with fixed-wing platforms in real-mission or production contexts
  • FAA Part 107 Remote Pilot Certificate required; demonstrated experience with BVLOS waivers, COA applications, or international UAS regulatory frameworks is strongly preferred;
  • Experience operating ArduPilot-based autopilot systems, including mission scripting, failsafe configuration, and GCS software (Mission Planner, QGroundControl);
  • Practical fixed-wing airframe flight experience, including manual RC aircraft proficiency and understanding of in-flight anomaly recognition;
  • Familiarity with RF link monitoring, C2 spectrum compliance, and antenna management for long-range UAV operations;
  • Experience with atmospheric sensing, meteorology, or operational weather forecasting is a strong plus;
  • Experience supporting field campaigns or flight tests in remote or international environments is highly valued;
  • Strong documentation habits: flight logs, incident reports, SOPs, and post-mission summaries suitable for regulatory review and program scaling;
  • Genuine passion for operating novel aerial platforms in service of real-world scientific or environmental missions, with comfort working at the intersection of field operations, engineering, and regulatory compliance.

LOCATION: Boulder, CO

#LI-TL1

The salary range for this role is $115,000 - $150,000. Compensation for the role will depend on a number of factors, including a candidate's qualifications, skills, competencies, and experience. FL112 currently offers healthcare coverage, annual incentive program, retirement benefits and a broad range of other benefits. Compensation and benefits information is based on FL112's good faith estimate as of the date of publication and may be modified in the future.

About Flagship Pioneering

Flagship Pioneering is a life sciences innovation enterprise that conceives, creates, resources, and develops first-in-category life sciences companies. The firm operates through its Flagship Labs unit, which is a dedicated innovation foundry that invents and launches transformative companies. Flagship Pioneering has created over 100 scientific ventures, resulting in over $34 billion in aggregate value, 500+ issued patents, and more than 50 clinical trials for novel therapeutic agents. The firm's portfolio includes companies in the fields of therapeutics, health technologies, and sustainability. Flagship Pioneering was founded in 2000 and is headquartered in Cambridge, Massachusetts.
Learn more about Flagship Pioneering
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