Fermentation Engineer II

Manus Bio

$75K — $95K *
Pharmaceuticals & Biotech
5 - 7 years of experience
Job Overview by Ladders

Qualifications

  • PhD in Industrial Fermentation Sciences or related field with 5+ years of experience.
  • Expertise in bench and pilot-scale fermentation process development.
  • Strong knowledge of microbial physiology.
  • Proficient in statistical tools for media design.
  • Critical thinker enthusiastic about solving complex challenges.

Responsibilities

  • Design and optimize batch, fed-batch, and continuous fermentation processes.
  • Develop strategies to enhance yield, productivity, titer, and process robustness.
  • Conduct media optimization and perform metabolic performance analysis.
  • Lead scale-up activities from laboratory to commercial manufacturing.
  • Identify and mitigate scale-dependent risks during process transitions.
  • Support technology transfer processes to CMOs or manufacturing sites.
  • Analyze process data and develop predictive models for fermentation performance.

Benefits

  • Hands-on position within a multidisciplinary team environment.
  • Opportunity to influence the commercialization of bio-alternatives.
  • Mentorship role for junior engineers and scientists.
  • Engagement with external partners and academic collaborations.
  • Focus on safety, sustainability, and regulatory compliance in process design.
Full Job Description
Fermentation Engineer II Augusta, Georgia, United States, Full-Time

We are seeking a Fermentation Engineer II to be a part of our process development team. This role focuses on fermentation science and development to bring new commercial bioprocesses through the Manus R&D pipeline. The Fermentation Engineer is responsible for the design, development, optimization, and scale-up of microbial fermentation processes to produce bio-alternatives, applying fundamental microbial physiology and fermentation science knowledge to achieve applied bioprocess objectives. This role bridges R&D and manufacturing, leading fermentation development from lab through pilot and commercial scales while ensuring robust, cost-effective, and scalable operations.

Overview

We are seeking a Fermentation Engineer II or Senior Fermentation Engineer to be a part of our process development team. This role focuses on fermentation science and development to bring new commercial bioprocesses through the Manus R&D pipeline. The Fermentation Engineer is responsible for the design, development, optimization, and scale-up of microbial fermentation processes to produce bio-alternatives, applying fundamental microbial physiology and fermentation science knowledge to achieve applied bioprocess objectives. This role bridges R&D and manufacturing, leading fermentation development from lab through pilot and commercial scales while ensuring robust, cost-effective, and scalable operations.

This hands-on position requires a desire and ability to work as an integral part of a multidisciplinary team, as well as the demonstration of a high degree of flexibility, creativity, and initiative. This person will be expected to play an integral part of Manus's process development team located in Augusta, GA.

Responsibilities

Process Development & Optimization
  • Design and optimize fermentation processes (batch, fed-batch, continuous) for microbial or cell culture systems.
  • Develop strategies to improve yield, productivity, titer, and process robustness.
  • Conduct media optimization, feeding strategies, and metabolic performance analysis.
  • Apply statistical tools (DOE, multivariate analysis) to accelerate process improvement.

Scale-Up & Technology Transfer
  • Lead fermentation scale-up activities from laboratory (bench-scale) to pilot and commercial manufacturing (e.g., 1L ? 4,000L ?40,000L).
  • Identify and mitigate scale-dependent risks (mixing, oxygen transfer, heat removal, shear sensitivity).
  • Support technology transfer to manufacturing sites or CMOs.
  • Develop scale-down models to troubleshoot commercial process deviations.

Process Characterization & Validation
  • Define critical process parameters (CPPs) and critical quality attributes (CQAs).
  • Support process characterization studies and regulatory submissions (as applicable).
  • Develop control strategies for consistent production performance.

Data Analysis & Digital Tools
  • Analyze process data using advanced analytics, modeling, and visualization tools.
  • Develop predictive models for fermentation performance and scale-up.
  • Implement digital tools (PAT, soft sensors, automation strategies) to improve process control.

Leadership & Collaboration
  • Lead cross-functional project teams involving strain engineering, downstream processing, and manufacturing.
  • Mentor junior engineers and scientists.
  • Collaborate with external partners, equipment vendors, and academic collaborators.

Safety & Compliance
  • Ensure compliance with EHS, GMP (if applicable), and regulatory guidelines.
  • Design processes with safety, sustainability, and regulatory considerations in mind.

Basic Qualifications
  • PhD with 5+ years in Industrial Fermentation Sciences, Engineering or related field

Required Technical Expertise
  • Expertise in bench and pilot-scale fermentation process development
  • Expertise in microbial physiology
  • Experience statistical tools for media design
  • Critical thinker with enthusiasm for deriving solutions to complex challenges

Preferred Experience
  • Experience in scale-up of fermentation processes from lab-scale to pilot plant and/or production-scale
  • Experience with analytical instrumentation (GC, LC)
  • Experience with fermentation modeling

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