Natera

Bioinformatics Production Engineer

Natera$114K — $143K *
Pharmaceuticals & Biotech
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's degree in Biomedical Engineering, Computer Science, Bioinformatics, or related field.
  • 2+ years of relevant professional experience.
  • Master's degree in a relevant scientific or technical discipline preferred.
  • Professional experience in biotechnology, diagnostics, or pharmaceutical industry preferred.
  • Knowledge of molecular biology, cell biology, and genetics.

Responsibilities

  • Analyze high-throughput DNA sequencing data to support product development and validation studies.
  • Identify and implement improvements to production workflows in data analysis pipelines.
  • Troubleshoot technical issues related to data quality and analysis systems.
  • Communicate and collaborate with cross-functional teams including biology and software engineering.
  • Produce high-quality written documentation, including study plans and technical reports.
  • Ensure compliance with data privacy protocols while handling Protected Health Information (PHI).
  • Complete HIPAA/PHI training and maintain ongoing training requirements.

Benefits

  • Long-term equity awards
  • Comprehensive health benefits (medical, dental, vision)
  • 401(k) with company match
  • Generous paid time off and company holidays
  • Additional wellness and work-life benefits
Full Job Description
POSITION SUMMARY:

The Bioinformatics Production Analyst performs basic data analysis to provide bioinformatics support for Horizon Carrier Screening and future platform sequencing tests, while actively participating in production pipeline improvements. In this role, the analyst plays a pivotal part in ensuring Natera provides high-quality carrier screening and sequencing products.

PRIMARY RESPONSIBILITIES:
  • Data Analysis & Processing: Analyze high-throughput DNA sequencing data and perform basic data analysis to support product development, validation studies, and incoming experiment analysis requests.
  • Pipeline Improvement & Support: Help move data through the analysis pipeline while proactively identifying and implementing improvements to production workflows.
  • Troubleshooting: Investigate and resolve technical issues related to data quality, analysis pipelines, and system integration.
  • Cross-Functional Collaboration: Communicate effectively and work collaboratively with cross-functional teams, including biology, software engineering, lab operations, and medical/legal affairs.
  • Documentation: Produce high-quality written documentation, including formal study plans and technical reports.
  • Compliance & PHI Safety: Regularly handle Protected Health Information (PHI) in both paper and electronic formats, ensuring strict adherence to data privacy technologies and protocols.
  • Training & Certification: Complete required HIPAA/PHI privacy, security, and General Policies and Procedures Compliance training within the first 30 days of hire, and maintain current status on all ongoing company training requirements.

QUALIFICATIONS:

Minimum Qualifications:
  • Bachelor's degree in Biomedical Engineering, Computer Science, Bioinformatics, or a related equivalent field.
  • 2+ years of relevant professional experience.

Preferred Qualifications:
  • Master's degree in a relevant scientific or technical discipline.
  • Previous professional experience within the biotechnology, diagnostics, or pharmaceutical industry.

KNOWLEDGE, SKILLS, AND ABILITIES:
  • Knowledge of biological concepts related to molecular biology, cell biology (specifically related to DNA/RNA), and genetics.
  • Experience and knowledge of how Sequencing Assays work.
  • Experience using Python for data analysis and plotting is preferred.
  • Experience using Linux command-line tools and relational databases (SQL) preferred, knowledge of data visualization tools/platforms a plus (plotly).
  • Knowledge of genomics, relevant NGS analyses (mapping, variant calling, etc.), and NGS file types is required. e.g. Know how to run pipelines and knowledge of pipeline platforms/languages (WDL, Nextflow).
  • Ability to produce high quality written documentation for varying audiences, e.g. validation reports
  • Familiarity with Large Language Models (LLMs), such as Claude Code, and how to leverage them to streamline workflows and tasks.
  • Ability to work independently while managing multiple objectives and timelines.
  • Desire to work in a fast-paced environment with potential for high impact in a small team.
  • Team player, self-motivated, and detail-oriented.


Compensation & Total Rewards

This range reflects a good-faith estimate of the base pay we reasonably expect to offer at the time of hire. Final compensation will vary based on experience, qualifications, and internal equity considerations.

This position is also eligible for additional compensation and benefits through Natera's robust Total Rewards program, including:
  • Long-term equity awards
  • Comprehensive health benefits (medical, dental, vision)
  • 401(k) with company match
  • Generous paid time off and company holidays
  • Additional wellness and work-life benefits


Compensation Range

$114,400-$143,000 USD

About Natera

Natera is a biotechnology company that focuses on genetic testing and diagnostics. The company's products are designed to help diagnose and treat genetic diseases, cancer, and other conditions. Natera's pipeline includes products for reproductive health, oncology, and organ transplantation. The company was founded in 2003 and is headquartered in San Carlos, California.
Learn more about Natera
Size
2,670 employees
Market Cap
$4.5 billion
Industry
Net Income
-$229.7 million
Founded
2004
5 Year Trend
+24.1%
Revenue
$391 million
NASDAQ

Similar Jobs

More Jobs at Natera

More Pharmaceuticals & Biotech Jobs

Find similar Bioinformatics Production Engineer jobs: