Johns Hopkins Applied Physics Lab

AI & Decision Engineer

Johns Hopkins Applied Physics Lab$100K — $245K *
Aerospace & Defense
Less than 5 years of experience
Job Overview by Ladders

Qualifications

  • Bachelor's degree in Computer Science, Engineering, Math, or Data Science
  • Experience building applications with large language models (LLMs)
  • Proficiency in Python and a modern web/backend framework
  • Knowledge of relational databases and query development
  • Hands-on experience with Retrieval-Augmented Generation (RAG) systems or LLM agent frameworks
  • Strong synthesis of complex technical information
  • Active Secret security clearance or the ability to obtain Top Secret clearance

Responsibilities

  • Architect and develop AI-powered analytical applications
  • Design and implement LLM agents for autonomous planning and action
  • Apply prompt engineering for data-driven recommendations
  • Manage RAG pipelines integrating large information repositories
  • Develop agents for interpreting databases and generating SQL queries
  • Evaluate prompting strategies to enhance model reasoning
  • Integrate tools for monitoring LLM pipelines

Benefits

  • Opportunity to work with cutting-edge AI technologies
  • Collaborate with multidisciplinary teams
  • Engagement with government and defense sponsors
  • Support for professional development and technical growth
  • Inclusive work environment that values diversity
Full Job Description
Description

The Systems Performance Analysis Group (KBS) at the Johns Hopkins University Applied Physics Laboratory is seeking a Generative AI & Decision Engineer to design, build, and deploy AI-enabled analytical and decision-support applications for Naval and Air Force sponsors. You will lead the development of human-LLM interaction capabilities, Retrieval-Augmented Generation (RAG) systems, and intelligent agents that operate at scale to support a variety of applications. This role will collaborate closely with internal stakeholders and external sponsors, including DoD organizations, to demonstrate and transition cutting-edge AI technologies into operationally relevant environments.

As anAI & Decision Engineer, you will...

Architect, develop, and evolve a Generative AI-powered analytical applications that support human-LLM interactions and LLM-driven decision-making at scale.

  • Design and implement LLM agents that can autonomously plan, reason, and act using tools such as RAG, analytical tools, and relevant databases.
  • Apply prompt engineering techniques with state-of-the-art models to produce data-driven recommendations based operational and developmental data for a variety of systems.
  • Design, implement, and manage RAG pipelines using vector databases and frameworks to integrate relevant documentation, prior analytical results, and large information repositories into LLM decision-making.
  • Develop and maintain agents capable of: (1) Interpreting database schemas and generating SQL queries to answer user questions (SQL agents). (2) Translating natural language inputs into structured actions and game events stored in a database for downstream simulation and adjudication.
  • Experiment with and evaluate prompting strategies to improve reasoning quality, robustness, and transparency of model outputs in high-consequence decision contexts.
  • Integrate orchestration and observability tools (e.g., Prefect) to monitor LLM pipelines, track outputs, and provide real-time insight into system behavior during wargame execution.
  • Fine-tune and adapt foundation models (e.g., Llama, Mistral) using AWS SageMaker, Hugging Face TRL, and synthetic data generation (e.g., GPT-4 series) to optimize performance on sponsor-specific tasks such as deductive coding, domain knowledge transfer, etc.
  • Engage with internal leadership and external sponsors to demonstrate capabilities, collect requirements, and potentially transition systems to operational users.
  • Document system architectures, experiments, evaluation results, and operational guidance; prepare and present technical briefings and reports to technical and non-technical stakeholders.
  • Collaborate in multidisciplinary teams (AI/ML, software, human factors, operations analysts) to integrate AI capabilities into broader analytic and operational workflows.

Qualifications

You meet our minimum qualifications for the job if you have...
  • Bachelor's degree in Computer Science, Computer Engineering, Electrical Engineering, Applied Mathematics, Data Science, or a closely related field.
  • Experience building production or prototype applications involving large language models (LLMs) or other generative models.
  • Proficiency in Python and at least one modern web/backend framework (e.g., FastAPI, Flask, Django).
  • Experience with relational databases, including schema design and query development (e.g., PostgreSQL).
  • Hands-on experience with at least one of:

    - Retrieval-Augmented Generation (RAG) systems.

    - LLM agent frameworks (tool use, ReAct, chain-of-thought-style prompting).

    - Vector databases (e.g., Qdrant, ChromaDB).
  • Demonstrated ability to comprehend and synthesize complex technical or scientific information and make timely, well-reasoned decisions
  • Strong written and oral communication skills, including experience preparing technical analyses and presenting findings to a range of audiences.
  • Hold an active Secret security clearance and can ultimately obtain Top Secret level clearance. If selected, you will be subject to a government security clearance investigation and must meet the requirements for access to classified information. Eligibility requirements include U.S. citizenship.

You'll go above and beyond our minimum requirements if you have...
  • Advanced degree (M.S. or Ph.D.) in Computer Science, AI/ML, Applied Mathematics, or related field.
  • Experience with:
    • LLM frameworks and libraries (e.g., Hugging Face Transformers, TRL, LangChain).
    • Fine-tuning and evaluating open-weight models (e.g., Llama, Mistral) on domain-specific tasks.
    • Cloud platforms and MLOps tooling (e.g., AWS, SageMaker, Prefect, MLflow).
    • Frontend development using React and integration with RESTful backends (e.g., FastAPI).
    • Experience developing AI systems in defense, space, or government contexts, including familiarity with military doctrine, wargaming, operational analysis, or mission planning.
    • Prior work on applications supporting Navy, DARPA, or other DoD sponsors, particularly in knowledge-management or decision-support contexts.
    • Demonstrated ability to engage with sponsors, understand mission needs, negotiate requirements, and translate them into technical solutions.


Additional Information:
  • This position may require occasional travel to sponsor sites and test events.
  • Candidates will be expected to work in multidisciplinary teams and contribute to both research and applied development efforts.
  • APL is committed to fostering an inclusive environment and encourages applications from diverse backgrounds.


Minimum Rate

$100,000 Annually

Maximum Rate

$245,000 Annually

About Johns Hopkins Applied Physics Lab

The Johns Hopkins University Applied Physics Laboratory (APL) is a research and development organization that provides solutions to national security and scientific challenges. The laboratory was founded in 1942 and is located in Laurel, Maryland. APL is a division of the Johns Hopkins University and is a not-for-profit organization. The laboratory has expertise in a variety of areas, including space exploration, national security, and healthcare.
Learn more about Johns Hopkins Applied Physics Lab
Size
7,000 employees
Industry
Founded
1942

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